Comparative Methods Software

• Mesquite: for everything (Wayne & Dave Maddison)
  
• PDAP: a module for conducting indepenent contrasts in Mesquite (Theo Garland)
• CoMET: a module for fitting alternative models of continuous character evolution (Todd Oakley)
  
• BayesTraits: for comparative analysis of discrete traits (Mark Pagel)
• ouch!: for testing O-U based adaptive models against Brownian motion for character evolution in R (M. Butler)
  
• Brownie: for testing changes in rates of evolution (Brian O'Meara)

Genomics

• Aquilegiomics (>70,000 ESTs; >7,000 Uni's) 
  
• CODEHOP (for designing highly-degenerate primers - that work!)
  
• T-DNAExpress (to find Arabidopsis single gene knockouts for your gene of interest) 
• Entrez - Genbank's Cross Database Search Engine
  
• All things Mimulus

Botanical Resources

• The Jepson Interchange
• Flora of North America (Aquilegia treatment)
• Peter Stevens' Angiosperm Phylogenetics Website  

Friends & Collaborators

• Maureen Stanton (UC Davis)
• Sharon Strauss (UC Davis)
  
• Susan Harrison (UC Davis) 
• Mike Sanderson (Arizona) 
• Scott Hodges (UC Santa Barbara)
  
• Aaron Liston (Oregon State Univ.)
  
• Matt Carlson (Univ. Alaska, Anchorage)
• Jessica Wright (USFS Institute of Forest Genetics) 
• Yael Kisel (Oxford University)
  

Recreation 

• Stormsurf's North California Quickcast

• North Pacific Wave Model 
• Favorite Run (map, save and share your favorite runs using Google Earth/Maps)